Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CHKACholine kinase alpha. (565 aa)    
Predicted Functional Partners:
PCYT1B
Phosphate cytidylyltransferase 1, choline, beta.
   
 
 0.980
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
   
 
 0.977
PCYT1A
Phosphate cytidylyltransferase 1, choline, alpha.
   
 
 0.961
ETNPPL
Ethanolamine-phosphate phospho-lyase isoform 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.941
GPCPD1
Glycerophosphocholine phosphodiesterase GPCPD1.
     
 0.941
CHAT
Choline O-acetyltransferase; Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.928
ACHE
Acetylcholinesterase (Cartwright blood group); Belongs to the type-B carboxylesterase/lipase family.
     
 0.924
ETNK2
Ethanolamine kinase 2.
     
0.879
ETNK1
Ethanolamine kinase 1.
     
0.852
TANC2
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2.
   
 
 0.772
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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