STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERZUncharacterized protein. (289 aa)    
Predicted Functional Partners:
CATSPER1
Ion_trans domain-containing protein.
    
 0.837
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 0.836
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
    
 0.834
CATSPER2
Cation channel sperm associated 2.
    
 0.832
CATSPER3
Ion_trans domain-containing protein.
    
 0.827
EFCAB9
Uncharacterized protein.
    
 0.824
CATSPER4
Cation channel sperm associated 4.
    
 0.823
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
 0.805
CATSPERE
Catsper channel auxiliary subunit epsilon.
    
 0.715
TMEM249
Transmembrane protein 249.
    
  0.689
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.