STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALS12Galectin. (330 aa)    
Predicted Functional Partners:
SERINC2
Serine incorporator 2.
      
 0.738
VPS13A
Vacuolar protein sorting 13 homolog A.
   
 
 0.715
CALCOCO2
Calcium binding and coiled-coil domain 2.
    
 
 0.703
VSTM4
V-set and transmembrane domain containing 4.
    
 
 0.627
HCAR1
Hydroxycarboxylic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.585
LSAMP
Limbic system associated membrane protein.
    
 
 0.574
LGALS13
Galectin.
  
   
 0.541
VPS13C
Vacuolar protein sorting 13 homolog C.
   
 
 0.533
EGR2
E3 SUMO-protein ligase EGR2; Sequence-specific DNA-binding transcription factor. Binds to two specific DNA sites located in the promoter region of HOXA4. Binds to the promoter region of ERBB2 (By similarity); Belongs to the EGR C2H2-type zinc-finger protein family.
    
 
 0.519
ABCD2
ATP-binding cassette sub-family D member 2 isoform X1.
   
  
 0.515
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.