Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL1639S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. (251 aa)    
Predicted Functional Partners:
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.991
MRPL2
Mitochondrial ribosomal protein L2.
  
 
 0.990
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.989
MRPL13
39S ribosomal protein L13, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.989
MRPS11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.989
MRPL22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.988
MRPL30
39S ribosomal protein L30, mitochondrial.
   
 
 0.987
MRPS16
28S ribosomal protein S16, mitochondrial.
   
 
 0.987
MRPS12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.986
MRPL3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.984
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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