STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KBTBD4Kelch repeat and BTB domain containing 4. (535 aa)    
Predicted Functional Partners:
RBM26
RNA binding motif protein 26.
      
 0.579
MBLAC1
Metallo-beta-lactamase domain containing 1.
      
 0.572
FAM214A
Family with sequence similarity 214 member A.
      
 0.570
ZC3H6
Zinc finger CCCH-type containing 6.
      
 0.565
DMWD
DM1 locus, WD repeat containing.
      
 0.546
CUL3
Cullin 3; Belongs to the cullin family.
    
 
 0.525
ISG20L2
Interferon-stimulated 20 kDa exonuclease-like 2 isoform X1.
      
 0.515
PRDM6
PR/SET domain 6.
      
 0.514
COPS2
COP9 signalosome subunit 2.
    
 
 0.512
BABAM1
BRISC and BRCA1 A complex member 1.
      
 0.512
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.