Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEX16Peroxisomal membrane protein PEX16. (336 aa)    
Predicted Functional Partners:
PEX19
Uncharacterized protein.
    
 0.995
PEX3
Peroxisomal biogenesis factor 3.
   
 0.978
PEX13
Peroxisomal biogenesis factor 13.
      
 0.947
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.879
PEX6
Peroxisomal biogenesis factor 6.
      
 0.869
PEX14
Peroxisomal biogenesis factor 14.
    
 0.845
PEX2
Peroxisomal biogenesis factor 2.
     
 0.818
PEX5
Peroxisomal biogenesis factor 5.
      
 0.809
SLC25A17
Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.789
PEX10
Pex2_Pex12 domain-containing protein.
      
 0.787
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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