STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX16Peroxisomal membrane protein PEX16. (336 aa)    
Predicted Functional Partners:
PEX13
Peroxisomal biogenesis factor 13.
     
 0.977
PEX19
Uncharacterized protein.
    
 0.975
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.946
PEX3
Peroxisomal biogenesis factor 3.
    
 0.932
PEX6
Peroxisomal biogenesis factor 6.
   
  
 0.899
PEX14
Peroxisomal biogenesis factor 14.
    
 0.879
PEX10
Pex2_Pex12 domain-containing protein.
      
 0.866
PEX7
Peroxisomal biogenesis factor 7.
      
 0.862
PEX2
Peroxisomal biogenesis factor 2.
     
 0.800
FIS1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
     
 0.783
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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