STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC17A6Solute carrier family 17 member 6. (582 aa)    
Predicted Functional Partners:
SLC32A1
Vesicular inhibitory amino acid transporter.
   
 
 0.979
SLC18A2
MFS domain-containing protein.
     
 0.954
SLC18A3
Solute carrier family 18 member A3.
     
 0.945
SLC18A1
Solute carrier family 18 member A1.
     
 0.920
SLC17A7
Solute carrier family 17 member 7.
  
 
0.908
SLC17A8
Solute carrier family 17 member 8.
  
  
0.902
GAD2
Glutamate decarboxylase 2; Catalyzes the production of GABA.
   
 
 0.704
GAD1
Glutamate decarboxylase 1; Catalyzes the production of GABA; Belongs to the group II decarboxylase family.
   
 
 0.686
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
  
 0.673
VOPP1
VOPP1 WW domain binding protein.
      
 0.665
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.