Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUCB2Uncharacterized protein. (472 aa)    
Predicted Functional Partners:
NUCB1
Nucleobindin 1.
   
   0.797
LMLN
Leishmanolysin-like peptidase.
      
 0.564
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
      
 0.552
VWCE
Von Willebrand factor C and EGF domains.
      
 0.550
SERGEF
Secretion regulating guanine nucleotide exchange factor.
      
 0.540
LAD1
Uncharacterized protein.
      
 0.505
ADCK1
AarF domain containing kinase 1.
      
 0.503
LOC100520401
ZnF_CDGSH domain-containing protein.
      
 0.475
RCN3
Reticulocalbin 3.
   
 
 0.475
DNAJC28
DnaJ heat shock protein family (Hsp40) member C28.
      
 0.464
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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