STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAMSAP3Calmodulin regulated spectrin associated protein family member 3. (1271 aa)    
Predicted Functional Partners:
RNF207
RING finger protein 207.
      
 0.869
WDR47
WD repeat domain 47.
 
 
 
 0.786
SASH3
SAM and SH3 domain containing 3.
      
 0.763
RAB33A
RAB33A, member RAS oncogene family.
      
 0.762
CYP2D25
Vitamin D(3) 25-hydroxylase; Catalyzes the first step in the metabolic activation of vitamin D(3) into 1-alpha,25-dihydroxyvitamin D(3), its active, hormonal form.
      
 0.721
MKRN2
Putative E3 ubiquitin-protein ligase makorin-2 isoform 1.
   
  
 0.689
TARS3
Threonyl-tRNA synthetase like 2.
      
 0.685
HAUS6
HAUS augmin like complex subunit 6.
      
 0.650
JMJD4
JmjC domain-containing protein 4 isoform X1.
      
 0.602
NIN
Ninein.
    
 
 0.585
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.