F1SA35_PIG protein (Sus scrofa) - STRING interaction network

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Score

F1SA35_PIG

Uncharacterized protein. (338 aa)

Predicted Functional Partners:

TRA2B

0.692

EWSR1

0.661

SRSF1

0.644

HNRNPM

0.642

ALYREF

0.641

SRSF3

0.640

SRSF2

0.621

SSB

0.617

HNRNPL

0.614

SF3B1

0.604

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALYREF	EWSR1	ENSSSCP00000071154	ENSSSCP00000046076	Aly/REF export factor.	EWS RNA binding protein 1.	0.581
ALYREF	F1SA35_PIG	ENSSSCP00000071154	ENSSSCP00000014461	Aly/REF export factor.	Uncharacterized protein.	0.641
ALYREF	HNRNPL	ENSSSCP00000071154	ENSSSCP00000044313	Aly/REF export factor.	Heterogeneous nuclear ribonucleoprotein L.	0.718
ALYREF	HNRNPM	ENSSSCP00000071154	ENSSSCP00000014455	Aly/REF export factor.	Heterogeneous nuclear ribonucleoprotein M.	0.618
ALYREF	SRSF1	ENSSSCP00000071154	ENSSSCP00000057405	Aly/REF export factor.	Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...]	0.944
ALYREF	SRSF2	ENSSSCP00000071154	ENSSSCP00000040547	Aly/REF export factor.	Serine/arginine-rich splicing factor 2; Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Binds to purine-rich RNA sequences, either 5'-AGSAGAGTA-3' (S=C or G) or 5 [...]	0.712
ALYREF	SRSF3	ENSSSCP00000071154	ENSSSCP00000001699	Aly/REF export factor.	Serine and arginine rich splicing factor 3.	0.876
ALYREF	TRA2B	ENSSSCP00000071154	ENSSSCP00000021460	Aly/REF export factor.	Transformer 2 beta homolog.	0.651
EWSR1	ALYREF	ENSSSCP00000046076	ENSSSCP00000071154	EWS RNA binding protein 1.	Aly/REF export factor.	0.581
EWSR1	F1SA35_PIG	ENSSSCP00000046076	ENSSSCP00000014461	EWS RNA binding protein 1.	Uncharacterized protein.	0.661
EWSR1	HNRNPM	ENSSSCP00000046076	ENSSSCP00000014455	EWS RNA binding protein 1.	Heterogeneous nuclear ribonucleoprotein M.	0.828
F1SA35_PIG	ALYREF	ENSSSCP00000014461	ENSSSCP00000071154	Uncharacterized protein.	Aly/REF export factor.	0.641
F1SA35_PIG	EWSR1	ENSSSCP00000014461	ENSSSCP00000046076	Uncharacterized protein.	EWS RNA binding protein 1.	0.661
F1SA35_PIG	HNRNPL	ENSSSCP00000014461	ENSSSCP00000044313	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein L.	0.614
F1SA35_PIG	HNRNPM	ENSSSCP00000014461	ENSSSCP00000014455	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein M.	0.642
F1SA35_PIG	SF3B1	ENSSSCP00000014461	ENSSSCP00000031130	Uncharacterized protein.	Splicing factor 3B subunit 1 isoform 1.	0.604
F1SA35_PIG	SRSF1	ENSSSCP00000014461	ENSSSCP00000057405	Uncharacterized protein.	Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...]	0.644
F1SA35_PIG	SRSF2	ENSSSCP00000014461	ENSSSCP00000040547	Uncharacterized protein.	Serine/arginine-rich splicing factor 2; Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Binds to purine-rich RNA sequences, either 5'-AGSAGAGTA-3' (S=C or G) or 5 [...]	0.621
F1SA35_PIG	SRSF3	ENSSSCP00000014461	ENSSSCP00000001699	Uncharacterized protein.	Serine and arginine rich splicing factor 3.	0.640
F1SA35_PIG	SSB	ENSSSCP00000014461	ENSSSCP00000057284	Uncharacterized protein.	Small RNA binding exonuclease protection factor La.	0.617