Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KRI1KRI1 homolog. (708 aa)    
Predicted Functional Partners:
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.985
UTP20
UTP20 small subunit processome component.
   
 0.968
UTP23
UTP23 small subunit processome component.
   
 
 0.959
NOP14
NOP14 nucleolar protein.
   
 0.956
TBL3
Transducin beta like 3.
   
  0.949
HEATR1
HEAT repeat containing 1.
   
 0.947
MPHOSPH10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
  0.937
NOP9
NOP9 nucleolar protein.
   
 0.935
RRP36
Novel protein similar to vertebrate chromosome 6 open reading frame 153 (C6orf153).
   
  0.930
SRFBP1
Serum response factor binding protein 1.
   
  0.925
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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