Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL5A3Collagen type V alpha 3 chain. (1747 aa)    
Predicted Functional Partners:
COL5A2
Collagen alpha-2(V) chain preproprotein.
  
0.892
COL5A1
Fibrillar collagen NC1 domain-containing protein.
  
 
0.841
COL6A1
Collagen type VI alpha 1 chain.
  
0.816
COL6A2
Collagen type VI alpha 2 chain.
   
0.797
SERPINH1
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.684
COL27A1
Collagen type XXVII alpha 1 chain.
  
 
0.649
COL2A1
Collagen type II alpha 1 chain.
  
0.638
COL4A2
Collagen type IV alpha 2 chain.
  
0.636
COL10A1
Type X collagen.
  
0.619
COL14A1
Collagen alpha-1(XIV) chain isoform X1.
   
0.613
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.