STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1S2M2_PIGSEA domain-containing protein. (255 aa)    
Predicted Functional Partners:
MUC1
SEA domain-containing protein.
   
  0.542
MUC13
Uncharacterized protein.
     
  0.499
MUC15
Mucin 15, cell surface associated.
     
  0.499
MUC20
Uncharacterized protein.
     
  0.499
MUC5AC
Uncharacterized protein.
     
  0.499
MUC4
Uncharacterized protein.
     
  0.499
MUC2
Uncharacterized protein.
     
  0.499
C1GALT1C1
Uncharacterized protein.
    
  0.419
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
    
  0.419
GALNT8
Polypeptide N-acetylgalactosaminyltransferase.
     
  0.400
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.