STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNPO2Transportin 2. (913 aa)    
Predicted Functional Partners:
TNPO1
Transportin 1.
   
  0.994
IPO4
Importin 4.
   
 0.968
IPO9
Importin 9.
   
 0.958
KPNB1
Karyopherin subunit beta 1.
   
 0.940
IPO13
Importin-13.
   
 
 0.937
IPO11
Importin 11.
   
 
 0.933
IPO5
Importin N-terminal domain-containing protein.
   
 0.926
TNPO3
Transportin 3.
   
 0.924
IPO7
Importin 7.
   
 0.912
IPO8
Importin 8.
   
 0.902
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.