Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATAT1 | MSH5 | ENSSSCP00000020536 | ENSSSCP00000034231 | Alpha-tubulin N-acetyltransferase 1; Specifically acetylates 'Lys-40' in alpha-tubulin on the lumenal side of microtubules. Promotes microtubule destabilization and accelerates microtubule dynamics; this activity may be independent of acetylation activity. Acetylates alpha-tubulin with a slow enzymatic rate, due to a catalytic site that is not optimized for acetyl transfer. Enters the microtubule through each end and diffuses quickly throughout the lumen of microtubules. Acetylates only long/old microtubules because of its slow acetylation rate since it does not have time to act on dyn [...] | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.792 |
ATAT1 | SYCE2 | ENSSSCP00000020536 | ENSSSCP00000014609 | Alpha-tubulin N-acetyltransferase 1; Specifically acetylates 'Lys-40' in alpha-tubulin on the lumenal side of microtubules. Promotes microtubule destabilization and accelerates microtubule dynamics; this activity may be independent of acetylation activity. Acetylates alpha-tubulin with a slow enzymatic rate, due to a catalytic site that is not optimized for acetyl transfer. Enters the microtubule through each end and diffuses quickly throughout the lumen of microtubules. Acetylates only long/old microtubules because of its slow acetylation rate since it does not have time to act on dyn [...] | Synaptonemal complex central element protein 2. | 0.724 |
MSH5 | ATAT1 | ENSSSCP00000034231 | ENSSSCP00000020536 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Alpha-tubulin N-acetyltransferase 1; Specifically acetylates 'Lys-40' in alpha-tubulin on the lumenal side of microtubules. Promotes microtubule destabilization and accelerates microtubule dynamics; this activity may be independent of acetylation activity. Acetylates alpha-tubulin with a slow enzymatic rate, due to a catalytic site that is not optimized for acetyl transfer. Enters the microtubule through each end and diffuses quickly throughout the lumen of microtubules. Acetylates only long/old microtubules because of its slow acetylation rate since it does not have time to act on dyn [...] | 0.792 |
MSH5 | RAD21 | ENSSSCP00000034231 | ENSSSCP00000006424 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Double-strand-break repair protein rad21 homolog. | 0.441 |
MSH5 | REC8 | ENSSSCP00000034231 | ENSSSCP00000002187 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Meiotic recombination protein REC8 homolog. | 0.629 |
MSH5 | SPO11 | ENSSSCP00000034231 | ENSSSCP00000073803 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae). | 0.552 |
MSH5 | SYCE2 | ENSSSCP00000034231 | ENSSSCP00000014609 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Synaptonemal complex central element protein 2. | 0.791 |
RAD21 | MSH5 | ENSSSCP00000006424 | ENSSSCP00000034231 | Double-strand-break repair protein rad21 homolog. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.441 |
RAD21 | REC8 | ENSSSCP00000006424 | ENSSSCP00000002187 | Double-strand-break repair protein rad21 homolog. | Meiotic recombination protein REC8 homolog. | 0.790 |
RAD21 | SPO11 | ENSSSCP00000006424 | ENSSSCP00000073803 | Double-strand-break repair protein rad21 homolog. | SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae). | 0.605 |
RAD21 | SYCE1 | ENSSSCP00000006424 | ENSSSCP00000011492 | Double-strand-break repair protein rad21 homolog. | Synaptonemal complex central element protein 1. | 0.614 |
RAD21 | SYCE2 | ENSSSCP00000006424 | ENSSSCP00000014609 | Double-strand-break repair protein rad21 homolog. | Synaptonemal complex central element protein 2. | 0.724 |
RAD21 | SYCE3 | ENSSSCP00000006424 | ENSSSCP00000001031 | Double-strand-break repair protein rad21 homolog. | Synaptonemal complex central element protein 3. | 0.452 |
RAD21 | SYCP3 | ENSSSCP00000006424 | ENSSSCP00000034487 | Double-strand-break repair protein rad21 homolog. | Synaptonemal complex protein 3. | 0.546 |
RAD21 | TEX12 | ENSSSCP00000006424 | ENSSSCP00000027044 | Double-strand-break repair protein rad21 homolog. | Testis expressed 12. | 0.610 |
REC8 | MSH5 | ENSSSCP00000002187 | ENSSSCP00000034231 | Meiotic recombination protein REC8 homolog. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.629 |
REC8 | RAD21 | ENSSSCP00000002187 | ENSSSCP00000006424 | Meiotic recombination protein REC8 homolog. | Double-strand-break repair protein rad21 homolog. | 0.790 |
REC8 | SPO11 | ENSSSCP00000002187 | ENSSSCP00000073803 | Meiotic recombination protein REC8 homolog. | SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae). | 0.864 |
REC8 | SYCE1 | ENSSSCP00000002187 | ENSSSCP00000011492 | Meiotic recombination protein REC8 homolog. | Synaptonemal complex central element protein 1. | 0.853 |
REC8 | SYCE2 | ENSSSCP00000002187 | ENSSSCP00000014609 | Meiotic recombination protein REC8 homolog. | Synaptonemal complex central element protein 2. | 0.734 |
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