Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMIM7Uncharacterized protein. (153 aa)    
Predicted Functional Partners:
COG2
Component of oligomeric golgi complex 2.
   
 
 0.813
PRR36
DUF4596 domain-containing protein.
    
 
 0.794
COG3
Component of oligomeric golgi complex 3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.792
TM9SF3
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.787
CASC4
Cancer susceptibility 4.
      
 0.787
COG7
Conserved oligomeric Golgi complex subunit 7 isoform X1.
   
 
 0.778
COG8
Uncharacterized protein.
   
 
 0.777
COG1
Conserved oligomeric Golgi complex subunit 1.
   
 
 0.777
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 
 0.770
COG5
Component of oligomeric golgi complex 5.
   
 
 0.756
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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