STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCEL1Occludin/ELL domain containing 1. (258 aa)    
Predicted Functional Partners:
RIT1
Ras like without CAAX 1.
      
 0.847
MYBPH
Myosin-binding protein H.
      
 0.776
DAPK2
Death associated protein kinase 2; Belongs to the protein kinase superfamily.
    
 
 0.609
CLDND1
Claudin domain containing 1.
      
 0.572
LYPD8
Ly6/PLAUR domain-containing protein 8 preproprotein.
      
 0.571
APLNR
Apelin receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.556
RAB4B
Uncharacterized protein.
   
  
 0.524
YIPF3
Protein YIPF.
      
 0.506
RAB31
RAB31, member RAS oncogene family.
      
 0.503
TLCD1
TLC domain containing 1.
      
 0.499
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.