Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOMER3Homer protein homolog 3 isoform X1. (359 aa)    
Predicted Functional Partners:
HOMER1
Homer scaffold protein 1.
    
0.995
HOMER2
Homer scaffold protein 2.
   
 
0.993
GRM1
Glutamate metabotropic receptor 1.
    
 0.972
GRM5
Glutamate metabotropic receptor 5.
    
 0.929
ARHGAP26
Rho GTPase activating protein 26.
   
  
 0.883
ZIC4
Zic family member 4.
      
 0.882
LGI1
Leucine rich glioma inactivated 1.
      
 0.872
DNER
Delta/notch like EGF repeat containing.
    
 
 0.837
AMPH
Uncharacterized protein.
    
 
 0.810
DSN1
Kinetochore-associated protein DSN1 homolog isoform 1.
    
   0.790
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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