STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CILP2Cartilage intermediate layer protein 2. (1163 aa)    
Predicted Functional Partners:
EMILIN1
Elastin microfibril interfacer 1.
      
 0.611
FITM1
Fat storage-inducing transmembrane protein 1; Plays an important role in lipid droplet accumulation. Belongs to the FIT family.
      
 0.571
CRISPLD1
Cysteine-rich secretory protein LCCL domain-containing 1 isoform 1.
      
 0.566
SNTN
Sentan, cilia apical structure protein.
      
 0.549
MATN3
Matrilin 3.
   
 
 0.523
C5orf58
Chromosome 5 open reading frame 58.
      
 0.523
CHST13
Carbohydrate sulfotransferase.
      
 0.519
MTBP
MDM2 binding protein.
      
 0.518
OTOR
Otoraplin.
      
 0.507
LOC110258854
Otoraplin.
      
 0.507
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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