Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBY3Uncharacterized protein. (157 aa)    
Predicted Functional Partners:
CBY2
Spermatid associated.
      
 0.823
SLC25A41
Solute carrier family 25 member 41; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.738
TOMM20L
Translocase of outer mitochondrial membrane 20 like.
      
 0.724
IFT20
Intraflagellar transport protein 20 homolog isoform X1.
      
 0.704
SLC25A2
Mitochondrial ornithine transporter 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.703
CHD3
Chromodomain-helicase-DNA-binding protein 3 isoform X1.
      
 0.701
SMIM9
Small integral membrane protein 9.
      
 0.701
SMIM8
Small integral membrane protein 8.
      
 0.693
IFT88
Intraflagellar transport 88.
      
 0.637
CHD1
Chromodomain helicase DNA binding protein 1.
      
 0.630
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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