Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMAN2Lectin, mannose binding 2. (359 aa)    
Predicted Functional Partners:
TMED10
Transmembrane emp24 domain-containing protein 10.
   
 0.872
TMED2
GOLD domain-containing protein.
   
 0.833
SEC31A
SEC31 homolog A, COPII coat complex component.
     
 0.766
MCFD2
Multiple coagulation factor deficiency 2.
     
 0.734
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
   
 
 0.693
A0A287A0I2_PIG
GOLD domain-containing protein; Belongs to the EMP24/GP25L family.
   
 
 0.673
MVB12B
Multivesicular body subunit 12B.
      
 0.669
TM9SF4
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 
 0.661
ERGIC3
ERGIC and golgi 3.
   
 
 0.652
GOLGA2
Uncharacterized protein.
   
 
 0.644
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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