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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF346Zinc finger protein 346 isoform X4. (310 aa)    
Predicted Functional Partners:
SLC4A1AP
Solute carrier family 4 member 1 adaptor protein.
      
 0.680
AMMECR1L
AMMECR1-like protein.
      
 0.680
TMUB2
Transmembrane and ubiquitin like domain containing 2.
      
 0.680
RBM45
RNA-binding protein 45 isoform X2.
      
 0.669
PRPF38A
Pre-mRNA processing factor 38A.
      
 0.660
CNOT10
CCR4-NOT transcription complex subunit 10.
   
  
 0.636
ZKSCAN5
Zinc finger protein with KRAB and SCAN domains 5 isoform X1.
   
 
 0.634
EDC3
Enhancer of mRNA decapping 3.
   
  
 0.629
TLK2
Tousled like kinase 2.
      
 0.612
USP39
U4/U6.U5 tri-snRNP-associated protein 2 isoform 1.
      
 0.612
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.