STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNCBBeta-synuclein; Belongs to the synuclein family. (183 aa)    
Predicted Functional Partners:
SNCG
Gamma-synuclein; Belongs to the synuclein family.
   
 
0.706
LYPD6B
LY6/PLAUR domain containing 6B.
   
  
 0.694
CPLX1
Complexin 1.
   
  
 0.635
NRSN2
Neurensin 2.
   
  
 0.619
FRRS1L
Ferric chelate reductase 1 like.
   
  
 0.553
PTMA
Prothymosin alpha.
      
 0.540
IYD
Iodotyrosine deiodinase 1; Catalyzes the oxidative NADPH-dependent deiodination of monoiodotyrosine (L-MIT) or diiodotyrosine (L-DIT). Acts during the hydrolysis of thyroglobulin to liberate iodide, which can then reenter the hormone-producing pathways. Acts more efficiently on monoiodotyrosine than on diiodotyrosine. Belongs to the nitroreductase family.
      
 0.515
GIGYF2
GRB10 interacting GYF protein 2.
      
 0.509
TIMM8B
Mitochondrial import inner membrane translocase subunit Tim8 B; Belongs to the small Tim family.
      
 0.497
MRRF
Ribosome-recycling factor, mitochondrial isoform 1.
      
 0.489
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.