Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDKL3Cyclin dependent kinase like 3. (617 aa)    
Predicted Functional Partners:
ADCK1
AarF domain containing kinase 1.
      
 0.738
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
      
 0.704
UBE2W
UBIQUITIN_CONJUGAT_2 domain-containing protein.
      
 0.664
ANKRD10
Ankyrin repeat domain 10.
    
 
 0.662
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 
 0.627
TMEM17
Transmembrane protein 17.
      
 0.604
VRK1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
      
 0.594
ATP2A3
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
      
 0.593
DGKB
Diacylglycerol kinase.
   
  
 0.564
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.549
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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