Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REEP2Receptor expression-enhancing protein. (275 aa)    
Predicted Functional Partners:
REEP1
Receptor expression-enhancing protein.
    
 
 0.846
REEP4
Receptor expression-enhancing protein.
    
 
 0.789
ATL1
Atlastin GTPase 1.
   
 
 0.765
RTN2
Reticulon.
   
 
 0.761
ATL3
Atlastin GTPase 3.
   
 
 0.711
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2.
      
 0.704
NPFFR1
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.702
RTN1
Reticulon.
   
 
 0.671
SHANK2
SH3 and multiple ankyrin repeat domains 2.
      
 0.627
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.626
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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