Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SPATA24Spermatogenesis-associated protein 24. (205 aa)    
Predicted Functional Partners:
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
      
 0.817
SIL1
SIL1 nucleotide exchange factor.
      
 0.769
ZSCAN2
Zinc finger and SCAN domain containing 2.
      
 0.724
TMEM266
Transmembrane protein 266.
      
 0.702
ETF1
Eukaryotic peptide chain release factor subunit 1 isoform 1.
      
 0.701
NME8
NME/NM23 family member 8.
      
 0.687
DNAJC8
DnaJ heat shock protein family (Hsp40) member C8.
      
 0.682
USP42
Ubiquitin specific peptidase 42; Belongs to the peptidase C19 family.
      
 0.640
LRRTM2
Leucine-rich repeat transmembrane neuronal protein 2.
      
 0.637
DDIAS
DNA damage induced apoptosis suppressor.
      
 0.621
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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