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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAC8L1PLAC8 like 1. (178 aa)    
Predicted Functional Partners:
FAM172A
Family with sequence similarity 172 member A.
      
 0.891
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
      
 0.736
PCYOX1
Prenylcysteine oxidase 1.
   
 
 0.626
TDRD3
Tudor domain containing 3.
      
 0.588
PRDM10
PR/SET domain 10.
    
 
 0.552
SLITRK1
SLIT and NTRK-like protein 1.
    
 
 0.521
ANAPC7
Anaphase promoting complex subunit 7.
      
 0.520
CCNL2
Cyclin-L2 isoform A; Belongs to the cyclin family.
      
 0.520
ENKUR
Enkurin, TRPC channel interacting protein.
      
 0.514
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 
 0.509
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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