Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATOH1 | EYA1 | ENSSSCP00000009805 | ENSSSCP00000038801 | Atonal bHLH transcription factor 1. | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | 0.512 |
ATOH1 | GFI1 | ENSSSCP00000009805 | ENSSSCP00000007358 | Atonal bHLH transcription factor 1. | Growth factor independent 1 transcriptional repressor. | 0.786 |
ATOH1 | MYO7A | ENSSSCP00000009805 | ENSSSCP00000015796 | Atonal bHLH transcription factor 1. | Unconventional myosin-VIIa; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails bind to membranous compartments, which are then moved relative to actin filaments. In the retina, plays an important role in the renewal of the outer photoreceptor disks. Plays an important role in the distribution and migration of retinal pigment epithelial (RPE) melanosomes and phagosomes, and in the regulation of opsin transport in retinal photoreceptors. In the inner ear, plays an important role in differenti [...] | 0.862 |
ATOH1 | POU4F3 | ENSSSCP00000009805 | ENSSSCP00000015335 | Atonal bHLH transcription factor 1. | POU domain protein. | 0.643 |
ATOH1 | SLC26A5 | ENSSSCP00000009805 | ENSSSCP00000066760 | Atonal bHLH transcription factor 1. | Prestin; Motor protein that converts auditory stimuli to length changes in outer hair cells and mediates sound amplification in the mammalian hearing organ; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. | 0.455 |
ATOH7 | EPHA8 | ENSSSCP00000023438 | ENSSSCP00000003824 | Atonal bHLH transcription factor 7. | EPH receptor A8. | 0.667 |
ATOH7 | FOXN4 | ENSSSCP00000023438 | ENSSSCP00000010603 | Atonal bHLH transcription factor 7. | Fork-head domain-containing protein. | 0.729 |
ATOH7 | MYO7A | ENSSSCP00000023438 | ENSSSCP00000015796 | Atonal bHLH transcription factor 7. | Unconventional myosin-VIIa; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails bind to membranous compartments, which are then moved relative to actin filaments. In the retina, plays an important role in the renewal of the outer photoreceptor disks. Plays an important role in the distribution and migration of retinal pigment epithelial (RPE) melanosomes and phagosomes, and in the regulation of opsin transport in retinal photoreceptors. In the inner ear, plays an important role in differenti [...] | 0.403 |
ATOH7 | POU4F3 | ENSSSCP00000023438 | ENSSSCP00000015335 | Atonal bHLH transcription factor 7. | POU domain protein. | 0.548 |
EPHA8 | ATOH7 | ENSSSCP00000003824 | ENSSSCP00000023438 | EPH receptor A8. | Atonal bHLH transcription factor 7. | 0.667 |
EPHA8 | FOXN4 | ENSSSCP00000003824 | ENSSSCP00000010603 | EPH receptor A8. | Fork-head domain-containing protein. | 0.548 |
EPHA8 | POU4F3 | ENSSSCP00000003824 | ENSSSCP00000015335 | EPH receptor A8. | POU domain protein. | 0.519 |
EYA1 | ATOH1 | ENSSSCP00000038801 | ENSSSCP00000009805 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | Atonal bHLH transcription factor 1. | 0.512 |
EYA1 | POU4F3 | ENSSSCP00000038801 | ENSSSCP00000015335 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | POU domain protein. | 0.523 |
FOXN4 | ATOH7 | ENSSSCP00000010603 | ENSSSCP00000023438 | Fork-head domain-containing protein. | Atonal bHLH transcription factor 7. | 0.729 |
FOXN4 | EPHA8 | ENSSSCP00000010603 | ENSSSCP00000003824 | Fork-head domain-containing protein. | EPH receptor A8. | 0.548 |
FOXN4 | POU4F3 | ENSSSCP00000010603 | ENSSSCP00000015335 | Fork-head domain-containing protein. | POU domain protein. | 0.549 |
GFI1 | ATOH1 | ENSSSCP00000007358 | ENSSSCP00000009805 | Growth factor independent 1 transcriptional repressor. | Atonal bHLH transcription factor 1. | 0.786 |
GFI1 | MYO7A | ENSSSCP00000007358 | ENSSSCP00000015796 | Growth factor independent 1 transcriptional repressor. | Unconventional myosin-VIIa; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails bind to membranous compartments, which are then moved relative to actin filaments. In the retina, plays an important role in the renewal of the outer photoreceptor disks. Plays an important role in the distribution and migration of retinal pigment epithelial (RPE) melanosomes and phagosomes, and in the regulation of opsin transport in retinal photoreceptors. In the inner ear, plays an important role in differenti [...] | 0.617 |
GFI1 | POU4F3 | ENSSSCP00000007358 | ENSSSCP00000015335 | Growth factor independent 1 transcriptional repressor. | POU domain protein. | 0.552 |
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