Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCGB1C1Uncharacterized protein. (95 aa)    
Predicted Functional Partners:
MST1
Hepatocyte growth factor-like protein; Belongs to the peptidase S1 family. Plasminogen subfamily.
      
 0.721
HEPACAM2
HEPACAM family member 2.
      
 0.640
PON1
Paraoxonase 1.
      
 0.639
FMO3
Dimethylaniline monooxygenase [N-oxide-forming].
      
 0.620
GNAZ
Guanine nucleotide-binding protein G(Z) subunit alpha isoform X1.
      
 0.558
PTPN20
Protein tyrosine phosphatase non-receptor type 20.
      
 0.555
UOX
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
      
 0.553
CACNA1A
Uncharacterized protein.
      
 0.545
CACNA1B
Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.
      
 0.545
GNAO1
Guanine nucleotide-binding protein G(O) subunit alpha isoform b.
      
 0.536
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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