Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BCL2L13 | FKBP8 | ENSSSCP00000067051 | ENSSSCP00000048283 | BCL2 like 13. | Peptidylprolyl isomerase. | 0.676 |
BCL2L13 | MARCHF5 | ENSSSCP00000067051 | ENSSSCP00000039616 | BCL2 like 13. | Membrane associated ring-CH-type finger 5. | 0.578 |
BCL2L13 | USP35 | ENSSSCP00000067051 | ENSSSCP00000015813 | BCL2 like 13. | Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family. | 0.572 |
DMWD | USP35 | ENSSSCP00000041993 | ENSSSCP00000015813 | DM1 locus, WD repeat containing. | Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family. | 0.575 |
DMWD | WDR48 | ENSSSCP00000041993 | ENSSSCP00000068677 | DM1 locus, WD repeat containing. | WD repeat domain 48. | 0.778 |
FKBP8 | BCL2L13 | ENSSSCP00000048283 | ENSSSCP00000067051 | Peptidylprolyl isomerase. | BCL2 like 13. | 0.676 |
FKBP8 | MARCHF5 | ENSSSCP00000048283 | ENSSSCP00000039616 | Peptidylprolyl isomerase. | Membrane associated ring-CH-type finger 5. | 0.491 |
FKBP8 | USP30 | ENSSSCP00000048283 | ENSSSCP00000053854 | Peptidylprolyl isomerase. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.685 |
FKBP8 | USP35 | ENSSSCP00000048283 | ENSSSCP00000015813 | Peptidylprolyl isomerase. | Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family. | 0.572 |
MARCHF5 | BCL2L13 | ENSSSCP00000039616 | ENSSSCP00000067051 | Membrane associated ring-CH-type finger 5. | BCL2 like 13. | 0.578 |
MARCHF5 | FKBP8 | ENSSSCP00000039616 | ENSSSCP00000048283 | Membrane associated ring-CH-type finger 5. | Peptidylprolyl isomerase. | 0.491 |
MARCHF5 | PARL | ENSSSCP00000039616 | ENSSSCP00000049967 | Membrane associated ring-CH-type finger 5. | Rhomboid domain-containing protein. | 0.467 |
MARCHF5 | USP30 | ENSSSCP00000039616 | ENSSSCP00000053854 | Membrane associated ring-CH-type finger 5. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.696 |
MARCHF5 | USP35 | ENSSSCP00000039616 | ENSSSCP00000015813 | Membrane associated ring-CH-type finger 5. | Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family. | 0.662 |
PARL | MARCHF5 | ENSSSCP00000049967 | ENSSSCP00000039616 | Rhomboid domain-containing protein. | Membrane associated ring-CH-type finger 5. | 0.467 |
PARL | USP30 | ENSSSCP00000049967 | ENSSSCP00000053854 | Rhomboid domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.680 |
PARL | USP35 | ENSSSCP00000049967 | ENSSSCP00000015813 | Rhomboid domain-containing protein. | Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family. | 0.619 |
PEX16 | USP30 | ENSSSCP00000014099 | ENSSSCP00000053854 | Peroxisomal membrane protein PEX16. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.508 |
PEX16 | USP35 | ENSSSCP00000014099 | ENSSSCP00000015813 | Peroxisomal membrane protein PEX16. | Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family. | 0.650 |
USP30 | FKBP8 | ENSSSCP00000053854 | ENSSSCP00000048283 | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | Peptidylprolyl isomerase. | 0.685 |
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