Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANGPTL5Angiopoietin-related protein 5. (388 aa)    
Predicted Functional Partners:
FAM180A
Family with sequence similarity 180 member A.
      
 0.702
ANGPTL8
Angiopoietin-like protein 8.
    
 0.673
GFRA2
GDNF family receptor alpha-2; Receptor for neurturin. Mediates the NRTN-induced autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor.
      
 0.640
SLC30A10
Uncharacterized protein.
   
  
 0.557
C17orf67
Chromosome 17 open reading frame 67.
      
 0.553
COL8A1
Collagen type VIII alpha 1 chain.
   
 0.534
COL14A1
Collagen alpha-1(XIV) chain isoform X1.
   
 0.519
OLFML1
Olfactomedin-like domain-containing protein.
   
  
 0.515
PROCA1
Protein interacting with cyclin A1.
   
  
 0.508
TEK
TEK receptor tyrosine kinase.
   
 0.488
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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