STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC84Coiled-coil domain-containing protein 84. (327 aa)    
Predicted Functional Partners:
C6orf52
Chromosome 6 open reading frame 52.
      
 0.897
TOR1A
Torsin.
      
 0.841
CCP110
Centriolar coiled-coil protein of 110 kDa isoform X1.
      
 0.749
TOR1AIP2
Torsin 1A interacting protein 2.
      
 0.728
PTGES3
Prostaglandin E synthase 3.
      
 0.664
ENTR1
Endosome associated trafficking regulator 1.
      
 0.664
TMEM208
Transmembrane protein 208.
      
 0.624
AMPD3
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
      
 0.609
SEPTIN8
Septin 8; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
      
 0.572
ACOX3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
      
 0.541
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.