Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ROBO3Roundabout guidance receptor 3. (1387 aa)    
Predicted Functional Partners:
ROBO1
Roundabout guidance receptor 1.
    
 0.924
SLIT2
Slit guidance ligand 2.
    
 0.903
SLIT1
Slit guidance ligand 1.
    
 0.865
SLIT3
Slit guidance ligand 3.
    
 0.741
ROBO2
Roundabout homolog 2 isoform X5.
    
 0.713
ROBO4
Roundabout guidance receptor 4.
    
0.696
TSSK4
Testis-specific serine/threonine-protein kinase 4 isoform 1.
    
 
 0.643
TTLL12
Tubulin tyrosine ligase like 12.
      
 0.620
ATP10D
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.594
NELL2
Neural EGFL like 2.
    
 0.584
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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