STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX25ATP-dependent RNA helicase DDX25 isoform 1. (483 aa)    
Predicted Functional Partners:
DDX19A
DEAD-box helicase 19B.
   
 0.826
A0A287AX99_PIG
Uncharacterized protein.
    
   0.758
GLE1
GLE1 RNA export mediator.
    
 
 0.738
PIWIL2
Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
  
 0.715
NUP214
Nucleoporin 214.
    
 
 0.708
HYLS1
HYLS1 centriolar and ciliogenesis associated.
      
 0.671
DAZL
Deleted in azoospermia-like protein.
   
 
 0.668
DDX51
DEAD-box helicase 51; Belongs to the DEAD box helicase family.
  
0.656
XPO1
Exportin 1.
    
 
 0.645
ZC3H14
Zinc finger CCCH-type containing 14.
   
 
 0.631
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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