STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKMY2Ankyrin repeat and MYND domain-containing protein 2. (441 aa)    
Predicted Functional Partners:
PHF20L1
PHD finger protein 20 like 1.
   
 
 0.784
LMAN2L
Lectin, mannose binding 2 like.
    
 
 0.730
PPP2R5C
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
 
 0.718
TSPAN13
Tetraspanin-13; Belongs to the tetraspanin (TM4SF) family.
      
 0.703
NMT1
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.
   
 
 0.684
CALHM6
Calcium homeostasis modulator family member 6.
      
 0.683
PDE8A
Phosphodiesterase.
      
 0.638
USP25
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
    
 
 0.578
CHD1
Chromodomain helicase DNA binding protein 1.
    
 
 0.559
NR2C1
Nuclear receptor subfamily 2 group C member 1 isoform a.
    
 
 0.556
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.