STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3ESemaphorin-3E isoform 1; Belongs to the semaphorin family. (775 aa)    
Predicted Functional Partners:
PLXND1
Plexin D1.
    
0.997
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.982
PLXNA2
Plexin A2.
    
 
 0.819
PLXNA3
Plexin A3.
    
 
 0.737
PTPRB
Receptor-type tyrosine-protein phosphatase beta isoform a.
   
 
 0.674
THBS1
Uncharacterized protein.
      
 0.673
MFN2
Mitofusin-2 isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.665
PLXNB3
Plexin B3.
    
 
 0.645
PLXNA1
Plexin A1.
    
 
 0.639
PLXNC1
Plexin C1.
    
 
 0.610
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.