GNAT3 protein (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GNAT3

G protein subunit alpha transducin 3. (354 aa)

Predicted Functional Partners:

RIC8A

0.975

TAS1R3

0.966

PLCB2

0.965

GNG13

0.961

GNB3

0.956

TAS1R1

0.952

TAS1R2

0.923

GNAT2

0.919

PDE1A

0.914

PLCB3

0.912

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNAT2	GNAT3	ENSSSCP00000007278	ENSSSCP00000016333	G protein subunit alpha transducin 2.	G protein subunit alpha transducin 3.	0.919
GNAT2	GNB3	ENSSSCP00000007278	ENSSSCP00000000727	G protein subunit alpha transducin 2.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 isoform 1.	0.952
GNAT2	GNG13	ENSSSCP00000007278	ENSSSCP00000008555	G protein subunit alpha transducin 2.	G protein subunit gamma 13.	0.715
GNAT2	PLCB2	ENSSSCP00000007278	ENSSSCP00000059295	G protein subunit alpha transducin 2.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.564
GNAT2	PLCB3	ENSSSCP00000007278	ENSSSCP00000013861	G protein subunit alpha transducin 2.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.564
GNAT2	RIC8A	ENSSSCP00000007278	ENSSSCP00000015487	G protein subunit alpha transducin 2.	RIC8 guanine nucleotide exchange factor A.	0.975
GNAT3	GNAT2	ENSSSCP00000016333	ENSSSCP00000007278	G protein subunit alpha transducin 3.	G protein subunit alpha transducin 2.	0.919
GNAT3	GNB3	ENSSSCP00000016333	ENSSSCP00000000727	G protein subunit alpha transducin 3.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 isoform 1.	0.956
GNAT3	GNG13	ENSSSCP00000016333	ENSSSCP00000008555	G protein subunit alpha transducin 3.	G protein subunit gamma 13.	0.961
GNAT3	PDE1A	ENSSSCP00000016333	ENSSSCP00000063286	G protein subunit alpha transducin 3.	Phosphodiesterase.	0.914
GNAT3	PLCB2	ENSSSCP00000016333	ENSSSCP00000059295	G protein subunit alpha transducin 3.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.965
GNAT3	PLCB3	ENSSSCP00000016333	ENSSSCP00000013861	G protein subunit alpha transducin 3.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.912
GNAT3	RIC8A	ENSSSCP00000016333	ENSSSCP00000015487	G protein subunit alpha transducin 3.	RIC8 guanine nucleotide exchange factor A.	0.975
GNAT3	TAS1R1	ENSSSCP00000016333	ENSSSCP00000003667	G protein subunit alpha transducin 3.	Taste 1 receptor member 1.	0.952
GNAT3	TAS1R2	ENSSSCP00000016333	ENSSSCP00000042780	G protein subunit alpha transducin 3.	Taste 1 receptor member 2.	0.923
GNAT3	TAS1R3	ENSSSCP00000016333	ENSSSCP00000003624	G protein subunit alpha transducin 3.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.966
GNB3	GNAT2	ENSSSCP00000000727	ENSSSCP00000007278	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 isoform 1.	G protein subunit alpha transducin 2.	0.952
GNB3	GNAT3	ENSSSCP00000000727	ENSSSCP00000016333	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 isoform 1.	G protein subunit alpha transducin 3.	0.956
GNB3	GNG13	ENSSSCP00000000727	ENSSSCP00000008555	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 isoform 1.	G protein subunit gamma 13.	0.996
GNB3	PDE1A	ENSSSCP00000000727	ENSSSCP00000063286	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 isoform 1.	Phosphodiesterase.	0.908