STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM183APhospholipid-transporting ATPase ID isoform X2. (376 aa)    
Predicted Functional Partners:
TMEM47
Transmembrane protein 47.
   
  
 0.584
TLK2
Tousled like kinase 2.
      
 0.573
RNF13
Ring finger protein 13.
      
 0.573
TMED4
Transmembrane p24 trafficking protein 4.
   
  
 0.518
HSF2BP
Uncharacterized protein.
      
 0.513
A0A287BJA7_PIG
Uncharacterized protein.
      
 0.513
RNF2
Ring finger protein 2.
      
 0.510
INPP5A
Inositol polyphosphate-5-phosphatase A.
   
  
 0.508
RCHY1
Ring finger and CHY zinc finger domain containing 1.
      
 0.499
SRRM1
Serine and arginine repetitive matrix 1.
      
 0.495
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.