STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA4PTPRF interacting protein alpha 4. (1210 aa)    
Predicted Functional Partners:
PIK3C2B
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta; Belongs to the PI3/PI4-kinase family.
      
 0.799
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.785
TEAD3
YBD domain-containing protein.
      
 0.775
PCDHAC2
Protocadherin alpha subfamily C, 2.
    
 
 0.767
PPFIBP1
PPFIA binding protein 1.
   
0.735
PPFIBP2
PPFIA binding protein 2.
   
0.735
RIMS1
Regulating synaptic membrane exocytosis 1.
   
 0.714
PKP4
Plakophilin 4.
   
  
 0.702
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.670
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.670
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.