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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEDDM1Transmembrane epididymal protein 1. (273 aa)    
Predicted Functional Partners:
LCN9
Lipocalin 9; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.588
SBK2
SH3 domain binding kinase family member 2; Belongs to the protein kinase superfamily.
      
 0.581
LCN6
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
      
 0.572
ADAM28
ADAM metallopeptidase domain 28.
      
 0.553
LCN8
Lipocalin 8; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.548
CST11
Cystatin 11.
      
 0.531
PATE2
Prostate and testis expressed protein 2.
      
 0.529
ADAM7
ADAM metallopeptidase domain 7.
      
 0.515
PATE1
Prostate and testis expressed 1.
      
 0.514
ADGRG2
Adhesion G protein-coupled receptor G2; Belongs to the G-protein coupled receptor 2 family.
      
 0.514
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.