Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TEDDM1Transmembrane epididymal protein 1. (273 aa)    
Predicted Functional Partners:
SBK2
SH3 domain binding kinase family member 2; Belongs to the protein kinase superfamily.
      
 0.786
LCN9
Lipocalin 9; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.600
LCN6
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
      
 0.568
LCN8
Lipocalin 8; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.568
CST11
Cystatin 11.
      
 0.565
ADAM28
ADAM metallopeptidase domain 28.
      
 0.426
PIK3C2A
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.
      
 0.425
PATE2
Prostate and testis expressed protein 2.
      
 0.424
ADAM7
ADAM metallopeptidase domain 7.
      
 0.420
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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