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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGSL1Regulator of G protein signaling like 1. (1087 aa)    
Predicted Functional Partners:
FBXO6
Uncharacterized protein.
      
 0.842
MRE11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
   0.690
RGS6
Regulator of G protein signaling 6.
      
 0.690
TMEM88B
Transmembrane protein 88B.
      
 0.640
MAD2L1BP
MAD2L1 binding protein.
      
 0.623
TAF8
TATA-box binding protein associated factor 8.
      
 0.612
STX12
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
  
 0.585
RGS13
Regulator of G protein signaling 13.
      
 0.573
PIGV
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 
 0.558
TEX35
Testis expressed 35.
   
  
 0.555
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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