STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VASH2Vasohibin-2 isoform X1. (355 aa)    
Predicted Functional Partners:
HSF2
Heat shock factor protein 2 isoform a.
      
 0.651
SLC25A12
Solute carrier family 25 member 12; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.612
TUBAL3
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.610
RFTN1
Raftlin, lipid raft linker 1.
      
 0.563
TTL
Tubulin--tyrosine ligase; Catalyzes the post-translational addition of a tyrosine to the C-terminal end of detyrosinated alpha-tubulin.
      
 0.520
GCM1
Glial cells missing transcription factor 1.
      
 0.515
CDKN1B
p27Kip1.
      
 0.515
MAP4
Microtubule-associated protein.
      
 0.514
MARK4
Non-specific serine/threonine protein kinase.
      
 0.514
NDNF
Neuron derived neurotrophic factor.
      
 0.509
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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