STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPD6BLY6/PLAUR domain containing 6B. (189 aa)    
Predicted Functional Partners:
BEND7
Uncharacterized protein.
      
 0.853
MBD5
Methyl-CpG binding domain protein 5.
   
 
 0.850
LRRC71
Leucine rich repeat containing 71.
   
  
 0.782
TATDN3
Putative deoxyribonuclease TATDN3 isoform X6.
      
 0.751
ANGEL2
Protein angel homolog 2 isoform a.
      
 0.750
ADAMTS19
ADAM metallopeptidase with thrombospondin type 1 motif 19.
      
 0.728
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.695
SNCB
Beta-synuclein; Belongs to the synuclein family.
   
  
 0.694
RPS6KC1
Ribosomal protein S6 kinase delta-1 isoform X3.
   
  
 0.678
GTDC1
Glycosyltransferase like domain containing 1.
      
 0.650
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.