STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNT2Cyclin T2; Belongs to the cyclin family. (618 aa)    
Predicted Functional Partners:
CDK9
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.999
AFF4
AF4/FMR2 family member 4 isoform X1.
   
 0.997
CCNT1
Cyclin T1; Belongs to the cyclin family.
    
 0.986
BRD4
Bromodomain containing 4.
   
 
 0.892
AFF1
AF4/FMR2 family member 1.
   
 0.880
ELL3
Elongation factor for RNA polymerase II 3.
   
 
 0.854
HEXIM1
HEXIM P-TEFb complex subunit 1.
    
 
 0.783
HEXIM2
HEXIM P-TEFb complex subunit 2.
    
 
 0.777
SUPT5H
Transcription elongation factor SPT5.
   
 
 0.720
MEPCE
Methylphosphate capping enzyme.
    
 
 0.699
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.