STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM163Transmembrane protein 163. (287 aa)    
Predicted Functional Partners:
VRK1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
      
 0.760
SLC22A3
Solute carrier family 22 member 3.
      
 0.729
QPCTL
Glutaminyl-peptide cyclotransferase-like protein isoform 1.
      
 0.688
CACNB2
Calcium voltage-gated channel auxiliary subunit beta 2.
      
 0.660
KHDRBS3
KH RNA binding domain containing, signal transduction associated 3.
      
 0.647
KCTD15
Potassium channel tetramerization domain containing 15.
      
 0.609
GNPDA2
Glucosamine-6-phosphate isomerase.
      
 0.541
SH2B1
SH2B adaptor protein 1.
      
 0.452
MTCH2
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.426
NEGR1
Neuronal growth regulator 1.
      
 0.426
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.