STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSMD1CUB and Sushi multiple domains 1. (3258 aa)    
Predicted Functional Partners:
RIMBP2
RIMS-binding protein 2 isoform X2.
      
 0.652
FRMPD1
FERM and PDZ domain containing 1.
   
  
 0.620
PPP1R14D
Protein phosphatase 1 regulatory inhibitor subunit 14D.
      
 0.612
NFATC2IP
Nuclear factor of activated T cells 2 interacting protein.
    
 
 0.555
A2ML1
Alpha-2-macroglobulin like 1.
    
 
 0.550
DTX1
Deltex E3 ubiquitin ligase 1.
      
 0.550
GPSM1
G protein signaling modulator 1.
      
 0.546
PRRC2C
Proline rich coiled-coil 2C.
    
 
 0.545
CUEDC2
CUE domain-containing protein 2.
      
 0.544
DLEC1
DLEC1 cilia and flagella associated protein.
    
 
 0.540
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.