STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD1Homeobox D1. (327 aa)    
Predicted Functional Partners:
HOXB1
Homeobox protein Hox-B1.
  
0.919
HOXA1
Homeobox protein Hox-A1 isoform X1.
   
 
 
0.903
SPRY1
Sprouty RTK signaling antagonist 1.
    
 
 0.579
IRX3
Iroquois-class homeodomain protein IRX-3 isoform X2.
   
 
 0.541
FLT4
Fms related tyrosine kinase 4; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
      
 0.508
PRRG1
Transmembrane gamma-carboxyglutamic acid protein 1 isoform 1.
      
 0.489
A0A287ABX1_PIG
Gla domain-containing protein.
      
 0.489
MTX2
Metaxin-2; Involved in transport of proteins into the mitochondrion.
      
 0.473
NIPAL2
NIPA like domain containing 2.
      
 0.463
ANGPT2
Angiopoietin-2; Binds to TEK/TIE2, competing for the ANGPT1 binding site, and modulating angiogenic signals mediated by ANGPT1. Can induce tyrosine phosphorylation of TEK/TIE2 in the absence of ANGPT1. In the absence of angiogenic inducers, such as VEGF, ANGPT2-mediated loosening of cell- matrix contacts may induce endothelial cell apoptosis with consequent vascular regression. In concert with VEGF, it may facilitate endothelial cell migration and proliferation, thus serving as a permissive angiogenic signal (By similarity).
      
 0.454
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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