STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJVKPejvakin. (351 aa)    
Predicted Functional Partners:
GSDMB
Gasdermin-B isoform 3.
      
 0.856
LOC100151870
Gasdermin C.
      
 0.731
SCAF11
SR-related CTD associated factor 11.
      
 0.642
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.639
GSDMD
Gasdermin-D.
      
0.633
KCNQ4
Potassium voltage-gated channel subfamily Q member 4; Belongs to the potassium channel family.
      
 0.623
SLITRK6
SLIT and NTRK like family member 6.
      
 0.611
CABP2
Calcium binding protein 2.
      
 0.610
TMC1
Transmembrane channel-like protein.
      
 0.597
ITPRID2
ITPR interacting domain containing 2.
      
 0.589
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.