STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKBP7Peptidylprolyl isomerase. (222 aa)    
Predicted Functional Partners:
VPS39
VPS39 subunit of HOPS complex.
      
 0.669
LARP1
La ribonucleoprotein domain family member 1.
   
 
 0.595
DERL2
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
  
 0.574
SUMF2
Sulfatase-modifying factor 2 isoform b.
    
 
 0.567
OS9
OS9 endoplasmic reticulum lectin.
      
 0.563
ERP44
Thioredoxin domain-containing protein.
   
 
 0.561
GCC2
GRIP and coiled-coil domain containing 2.
   
 
 0.557
PDIA5
Protein disulfide isomerase family A member 5.
   
 
 0.539
EMC4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
  
 0.535
PDIA4
Protein disulfide-isomerase.
   
 
 0.529
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.