STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC141Ig-like domain-containing protein. (1524 aa)    
Predicted Functional Partners:
AOPEP
Aminopeptidase O (putative).
      
 0.757
TTN
Uncharacterized protein.
 
 
  
0.726
RUSC2
RUN and SH3 domain containing 2.
      
 0.693
LGI2
Leucine-rich repeat LGI family member 2.
    
 
 0.667
RAI14
ANK_REP_REGION domain-containing protein.
    
 
 0.634
KLHL38
Kelch like family member 38.
   
 
 0.600
UNC45B
UNC45-central domain-containing protein.
   
 
 0.597
FNDC4
Fibronectin type III domain containing 4.
      
 0.580
FAIM2
Fas apoptotic inhibitory molecule 2; Belongs to the BI1 family.
      
 0.568
EFCAB11
EF-hand calcium binding domain 11.
    
 
 0.565
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.